BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B12SP1|AL425082
(1014 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig233 1857 0.0
>3x_Contig233
Length = 1128
Score = 1857 bits (936), Expect = 0.0
Identities = 964/968 (99%), Gaps = 4/968 (0%)
Strand = Plus / Minus
Query: 1 aagctgccagagctggntgaattgttgaaggaaaacaacgttaatccagatatccttttc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 aagctgccagagctgg-tgaattgttgaaggaaaacaacgttaatccagatatccttttc 909
Query: 61 acttccaaattgaccagagctatccaaaccgctaacattgctttggaaaaagctgacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 acttccaaattgaccagagctatccaaaccgctaacattgctttggaaaaagctgacaga 849
Query: 121 ttgtggattcctgtcgttagatcctggagattgaacgaaagacactacggtgctctacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ttgtggattcctgtcgttagatcctggagattgaacgaaagacactacggtgctctacaa 789
Query: 181 ggtaaggacaaggctgccactttggaacaatacggtgaagaacaattcaccacctggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ggtaaggacaaggctgccactttggaacaatacggtgaagaacaattcaccacctggaga 729
Query: 241 agatccttcgatatcccacctccagttatcgaagacgactctccattctctcaaagcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agatccttcgatatcccacctccagttatcgaagacgactctccattctctcaaagcaac 669
Query: 301 gacccacgttacggtgacgttgacccaagtgtcttgccaaagaccgaatccttggctcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gacccacgttacggtgacgttgacccaagtgtcttgccaaagaccgaatccttggctcta 609
Query: 361 gtcattgacagattgttgccatactggcaagacagcatctcttccgagttgctacaaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gtcattgacagattgttgccatactggcaagacagcatctcttccgagttgctacaaggt 549
Query: 421 aagaccgtcatgatcaccgcccacggtaactctttgagagctttggtcaagcatttggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aagaccgtcatgatcaccgcccacggtaactctttgagagctttggtcaagcatttggaa 489
Query: 481 cacatctccgatgctgacattgctaagttgaacattccaaccggtatcccattggtgttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cacatctccgatgctgacattgctaagttgaacattccaaccggtatcccattggtgttc 429
Query: 541 gatttggacgaaaacttgaagccaaccaagccttcttactacttggacccagaagctgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gatttggacgaaaacttgaagccaaccaagccttcttactacttggacccagaagctgct 369
Query: 601 gctgcaggtgctgccgcagtcgctgctcaaggtaagaaatagatgaaataatgttccctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gctgcaggtgctgccgcagtcgctgctcaaggtaagaaatagatgaaataatgttccctt 309
Query: 661 tcttatttttagtatagattattatgtttaagacaatgaaataaaataaattttaaagac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcttatttttagtatagattattatgtttaagacaatgaaataaaataaattttaaagac 249
Query: 721 aaaaaagttaacaaggaaaacctgcatgtcaagcatttttcacttggataatcgccattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaaaaagttaacaaggaaaacctgcatgtcaagcatttttcacttggataatcgccattt 189
Query: 781 tgcacgtcgtttcaacctcatctccatccgcagtctatttacgtcataatctttgtattt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tgcacgtcgtttcaacctcatctccatccgcagtctatttacgtcataatctttgtattt 129
Query: 841 tttgtaccattcaccgttactaccttgtagaatttcttcttcgagcggcgatgcatttgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tttgtaccattcaccgttactaccttgtagaatttcttcttcgagcggcgatgcatttgc 69
Query: 901 atctgcatctgaatctgcatgctgtgaatc-ta-tggtattaacagcacgataatc-gta 957
|||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct: 68 atctgcatctgaatctgcatgctgtgaatcatagtggtattaacagcacgataatcggta 9
Query: 958 catgatct 965
||||||||
Sbjct: 8 catgatct 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8207
Number of Sequences: 1807
Number of extensions: 8207
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 1014
length of database: 10,358,551
effective HSP length: 16
effective length of query: 998
effective length of database: 10,329,639
effective search space: 10308979722
effective search space used: 10308979722
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)